There is a pressing need to understand how changing climate interacts with land-use change to affect predator-prey interactions in fragmented landscapes. This is particularly true in boreal ecosystems facing fast climate change and intensification in forestry practices. Here, we investigated the relative influence of autumn climate and habitat quality on the food-storing behaviour of a generalist predator, the pygmy owl, using a unique data set of 15?850 prey items recorded in western Finland over 12?years. Our results highlighted strong effects of autumn climate (number of days with rainfall and with temperature